NRL of Molecular Biology

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Chef Laboratory: Assoc. Prof. Viktoriya Levterova, PhD, This email address is being protected from spambots. You need JavaScript enabled to view it.

Conatacts: tel. 02/944 69 99 / int. 290, 353 /

 

Composition of the laboratory:

Chief Assist. Nadia Brankova, PhD

Chief Assistant Ivan Simeonovski, PhD

Magi Ivanova - biologist

Kristin Tankova - medical Assistant

Krassimira Vassileva - lab worker

 

History of the laboratory

This laboratory was found in 1972 by Prof. S. Todorov as a Radiational Microbiology Laboratory in the Department of Molecular and Cell Biology in the Institute. Its activity was linked to isotopic analysis of nucleic acids of microorganic origin; Molecular hybridization; Gradient analysis and more. Since 1992-2000 the laboratory has been renamed to the Laboratory of Radiational Microbiology and RNA Technologies and was led by Assoc. Prof. Dr. V. Zlatev. The main directions in the team's development were: study of serovar specific plasmids of salmonella strains; plasmid analysis of epidemic dysenteric strains; Genetics and metabolism of pertussis bacteria. Since 2000 the head of the Laboratory of Molecular and Radiation Microbiology was Assoc. Prof. Panayotov, PhD. The main directions of the laboratory activity are: routine diagnostics by PCR and RT-PCR test for B. pertussis, atypical pneumonia acquired by C. pneumoniae, M. pneumoniae, chlamydial infections (C. trachomatis) , Development of molecular-epidemiological methods - Random Amplification of Polymorphic DNA (RAPD), Amplified fragment length polymorphism (AFLP).

From 2012 the laboratory developed and introduced diagnostics for bacterial meningitis by conventional PCR and RealTime PCR for N. meningitidis, S. pneumoniae, H. influenzae. In 2013 and 2014 N. meningitidis typing by RealTimePCR was introduced and the typing of 16 S. pneumoniae serotypes/serogroups was applied by conventional PCR. In 2016 was implemented a typing of 6 serogroups for H. influenzae by RealTimePCR and we introduced diagnostics for Bordetella parapertussis by conventional PCR.

 

 IMG 0117 2IMG 0135 2

 

 Diagnostic tests conducted in the laboratory

Every year, the quality of the laboratory's diagnostics work is controlled and certified by the Institute for Standardization and Documentation of Medical Laboratories

 INSTAND, Düsseldorf, Germany.

  • Test for pertussis (Bordetella pertussis)

Whooping cough, also known as pertussis is a vaccine-preventable, acute infectious disease of the respiratory tract caused by the gram-negative coccobacillus Bordetella pertussis. The infection is transmitted by airborne droplets. It affects all age groups, but the most vulnerable group of society are infants under one year of age, who are at the greatest risk of severe complications or even death.

Suitable materials for testing by PCR are nasopharyngeal and throat secretions.

  • Test for parapertussis (Bordetella parapertussis)

Parapertussis is a highly contagious respiratory disease affecting all age groups of the population. The causative agent is the Gram-negative bacterium Bordetella parapertussis, which is related to Bordetella pertussis. Infants (under 6 months of age) may experience a more severe course of parapertussis infection. In them, as well as in patients of other age groups, it is possible to demonstrate a co-infection of pertussis with parapertussis.

Suitable materials for testing by PCR are nasopharyngeal and throat secretions.

  • Chlamydia infection (Chlamydia trachomatis)

Chlamydial infection is caused by an intracellular bacterium called Chlamydia trachomatis. It is sexually transmitted and affects both men and women. Suitable materials for PCR testing for men are first morning urine or urethral secretion, and for women a cervical secretion taken by a gynecologist.

  • A test for community acquired atypical pneumonia caused by Chlamydophila pneumoniae, Mycoplasma pneumoniae, Streptococcus pneumoniae and Haemophilus influenzae.

Chlamydophila pneumoniae, Mycoplasma pneumoniae, Streptococcus pneumoniae and Haemophilus influenzae cause atypical pneumonia. Infectious is reported to be transmitted by air-droplet route. Suitable materials for PCR testing are throat secretion, sputum or BAL (broncho-alveolar lavage)

  • Test for Helicobacter pylori

Helicobacter pylori is a spiral gram-negative microorganism. Experts have found that it exists in the stomach of about 50% of the population. Much of the infected are without symptoms and do not suspect problems with gastrointestinal disorders - ulcers, GERD, gastric cancer.

Suitable materials for PCR testing are materials from biopsy.

  • Bacterial meningitis (Neisseria meningitidis, Streptococcus pneumoniae and Haemophilus influenzae)

Many bacteria cause meningitis. Neisseria meningitides, Streptococcus pneumoniae and Haemophilus influenzae cause about 80% of the cases. Etiology depends on whether the infection is acquired in a hospital or is acquired in society, with the age and general condition of the patient being of particular importance. Infection with the causative agent is by air-dripping from sick or healthy bacterial carriers and cranial trauma. The classic symptoms of acute bacterial meningitis include fever, headache, general hyperaesthesia (light-headedness, intolerance to strong sounds and touch), meningitis, and disturbances in consciousness. Meningial symptoms are due to irritation of brain envelopes due to increased intracranial pressure caused by cerebral edema and malfunctions in the cerebral spinal fluid.

 

 IMG 0123 2

 

 

  Laboratory activity

         The laboratory has been accredited by the Bulgarian Accreditation Service (BAS) since 2003 according to the European requirements of the standard BNS ISO EN 17025 for high quality of work.

Since 1998, the quality of diagnostic work has been controlled and certified by the Institute of Standardization and Documentation of Medical Laboratories,  INSTAND, Düsseldorf, Germany.

Since 2006, the laboratory has organized National External Laboratory Control of Molecular Biological Diagnostics in Bulgaria by issuing certificates.

An annual course is included in the Specialization program including molecular diagnostics and typing of infectious agents.

Students, specialists and PhD students are trained in the laboratory.

The laboratory regularly publishes results of its work in specialized international and Bulgarian scientific journals and reports to national and international congresses.

 

PRICES

Analyzed microorganisms 

Type of analysis 

Price

 Bordetella pertussis

 RealTime PCR

41 BGL

 Bordetella parapertussis

 RealTime PCR

41 BGL

 Chlamydia trachomatis

 RealTime PCR

41 BGL

 Helicobacter pylori

 PCR

41 BGL

 Chlamydophila pneumoniae

 RealTime PCR

41 BGL

 Mycoplasma pneumoniae

 RealTime PCR

41 BGL

 Neisseria meningitidis

 RealTime PCR

41 BGL

Haemophilus influenzae

 RealTime PCR

41 BGL

Streptococcus pneumoniae

 RealTime PCR

41 BGL

Neisseria gonorrhoeae

 RealTime PCR

41 BGL

Mycoplasma genitalium

 RealTime PCR

41 BGL

Ureaplasma urealyticum

 RealTime PCR

41 BGL

Mycoplasma hominis

 RealTime PCR

41 BGL

Taking a throat or eye discharge

 

4 BGL

In the NRL "Molecular Microbiology" active research activities are carried out, and the most significant scientific topics in the last five years are:

1.1. FNI project: Molecular genetic identification and creation of an archival genome bank of circulating S. pneumoniae in children, as well as analysis of the prevalent serotypes associated with the introduction of pneumococcal vaccines in the Republic of Bulgaria.

1.2. Project: "Fundamental, translational and clinical research in the field of infections and infectious immunology" under the Operational Program "Science and Education for Intelligent Growth", NCZPB.

1.3. FNI project: "Molecular-genetic studies on the prevalence of pneumocystosis in people in Bulgaria".

1.4. FNI project: No. KP-06-DK 1/10 29.03. 2021 "Study of the interaction of specific structural proteins of SARS-CoV-2 with biologically active molecules and their application to create rapid antigen tests for early diagnosis of COVID-19", under "Competition for funding fundamental scientific research on societal challenges related to with the COVID-19 pandemic – 2020.”

The results of the laboratory's scientific activity over the past five years have been presented in the following publications in international and national refereed journals:

  1. Viktoriya Stefanova Levterova , Ivan Marinov Simeonovski, Nadia Boyanova Brankova, Magi Ventsislavova Ivanova, Ivva Ognianova Philipova  and Mariya Rumenova Malcheva, “CARRIAGE AND DISTRIBUTION OF SEROTYPES STREPTOCOCCUS PNEUMONIAE IN HEALTHY VACCINATED CHILDREN FOR THE YEAR 2021 IN BULGARIA”, World Journal of Advanced Research and Reviews , 2022, 14(03), 511–516 Article DOI: 10.30574/wjarr.2022.14.3.0594, DOI:https://doi.org/10.30574/wjarr.2022.14.3.0594, IF:7,6
  1. Victoria Levterova, Ivan Simeonovski, Nadia Brankova, Todor Kantarjiev. Meningococcal meningitis – diagnosis and serotyping by molecular methods. Med Info, 2020, 3, 76-80
  2. Nadia Brankova, Victoria Levterova, Ivan Simeonovski, Maria Malcheva, Todor Kantarjiev. General analysis of the spread of pertussis infection in Bulgaria for a ten-year period (2009 - 2018) Pediatrics 2020, issue 3, 26-29 Q4
  3. Philipova I, Levterova V, Simeonovski I, Kantardjiev T. “Azithromycin treatment failure and macrolide resistance in Mycoplasma genitalium infections in Sofia, Bulgaria”, Folia Med Plovdiv, [in press] Impact factor: 0.378 Q4

http://www.proceedings.bas.bg/ddn/IF_Metrics.html, file:///C:/Users/MolecularLaptop/Downloads/FM_article_63624_en_1.pdf

  1. Ivva Philipova,Victoriya Levterova,Ivan Simeonovski,Todor Kantardjiev, High rate of fluoroquinolone resistant Neisseria gonorrhoeaedetected by molecular surveillance of antimicrobial resistance determinants in Bulgaria, Biotechnology & Biotechnological Equipment, Pages 942-948 | Received 04 Jul 2022, Accepted 07 Nov 2022, Published online: 17 Nov 2022, DOI: 1080/13102818.2022.2146532 Impact factor: 1.762
  1. Ivva Philipova, Viktoryia Levterova,Ivan Simeonovski, Todor Kantardjiev. Antimicrobial Resistance and Whole Genome Sequencing Analysis of Neisseria gonorrhoeae Isolates in Bulgaria, 2019, p.1579.BIOLOGY Microbiology, IF: 0,378

https://www.proceedings.bas.bg/index.php/cr

  1. Philipova I, Levterova V, Simeonovski I, Kantardjiev T. “Azithromycin treatment failure and macrolide resistance in Mycoplasma genitalium infections in Sofia, Bulgaria”, Folia Med Plovdiv, [in press] http://www.proceedings.bas.bg/ddn/IF_Metrics.html. IF:378 
  2. Levterova, V., I. Simeonovski, N. Brankova, I. Filipova, M. Malcheva, T. Veselov Kantarjiev. Carriage and prevalence of Streptococcus pneumoniae serotypes in healthy children up to 6 years of age in Bulgaria after introduction of PCV10 in the national vaccination calendar, Pediatrics, VOLUME LXII, 3/2022 Q4
  3. Victoria Levterova, Ivan Simeonovski, Nadia Brankova, Magi Ivanova, Ivva Philipova, Mariya Malcheva , A CASE REPORT OF a child with recurrENT catarrh CO-COLONIZED with five STREPTOCOCCUS pneumoniae serotypes, PROBLEMS of infectious and parasitic diseases, August 11, 2022,ISSN: 0204-9155 (Print), SSN: 2815-2808 (Online) Q4
  4. Malcheva, I. Philipova, I. Simeonovski, V. Levterova, N. Brankova, T. Kantardjiev “Antimicrobial susceptibility of S. pneumoniae strains isolated from children with nasopharyngeal carriage”, Problems of Infectious and Parasitic Diseases 48(1):15-20, 2020 Q4
  5. Philipova, V. Levterova, I. Simeonovski, Z. Ivanova, L Boyanova, Kantardjiev “Prevalence of Neisseria gonorrhoeae and Mycoplasma genitalium in Bulgarian population from Sofia municipality of reproductive age, 2018-2019” Problems of Infectious and Parasitic Diseases 49(2):20-26, 2021 Q4
  6. Tomova, R. Nenova, N. Brankova, V. Levterova. Diagnosis of Legionnaires' disease in Bulgarian patients. In Spiro 2020, 55(4), 29-33
  7. Malcheva M., I. Simeonovski, V. Levterova, N. Brankova, I. Filipova, T. Kantarjiev. Genetic studies on carriage and prevalence of Streptococcus pneumoniae serotypes in children. 2019, no. 4, 43-45 Q4
  8. Tsvetkova, A. Ivanova, R. Harizanov, I. Rainova, N. Yancheva-Petrova, D. Strashimirov, R. Enikova, M. Videnova, E. Kaneva, I. Kaftandjiev, V. Levterova, I. Simeonovski, A Pilot Study of Drug Resistance in Pneumocystis Jirovecii Isolates from Bulgarian Patients with Pneumocystis Pneumonia, Conference Proceedings, Istanbul Turkey Jun 28-29, 2021, Part XIV

 

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